丛枝菌根真菌状巨孢囊霉孢子伴生细菌的绿色荧光蛋白标记及定殖分析

摘要：【目的】分析丛枝菌根（Arbuscualr Mycorrhizal, AM）真菌珠状巨孢囊霉(Gigaspora margarita) MAFF 520054孢子伴生细菌的定殖情况,明确其生态位点,以及为进一步分析其种群生态或功能提供信息。【方法】以载体pNF8（gfp-mut1）对6株珠状巨孢囊霉MAFF 520054 孢子伴生细菌进行绿色荧光蛋白（GFP）标记,并通过荧光显微镜和平板计数的方法研究标记菌株对真菌宿主的定殖位点和不同条件下的定殖数量动态。【结果】对粘状芽孢杆菌（Peanibacillus spp.）M060106-1和M061122-6、芽孢杆菌（Bacillus sp.）M061122-10和短小芽孢杆菌（Brevibacillus sp.）M061122-12成功进行了GFP标记,其均具有较好的质粒稳定性,且与出发株的基本性状一致,适合短期内进行环境定殖研究。所有菌株均能定殖珠状巨孢囊霉MAFF 520054孢子壁,而M061122-6和M061122-12还能够定殖其菌丝;不同pH值条件下,各菌株定殖珠状巨孢囊霉MAFF 520054孢子的数量动态均为先上升后下降,pH值对各菌株的定殖数量有不同的影响;各GFP菌株对低活力的珠状巨孢囊霉孢子定殖数量高于高活力的孢子,且对高活力孢子的定殖数量动态不同。【结论】分离的珠状巨孢囊霉孢子伴生细菌能够重新定殖其孢子,菌株的定殖能力受其特性及外界因子的影响,为进一步分析AM真菌伴生细菌的种群生态及功能提供了信息。     

A novel interaction of CLN3 with nonmuscle myosin-IIB and defects in cell motility of Cln3 cells

Juvenile neuronal ceroid lipofuscinosis (JNCL) is a pediatric lysosomal storage disorder characterized by accumulation of autofluorescent storage material and neurodegeneration, which result from mutations in CLN3. The function of CLN3, a lysosomal membrane protein, is currently unknown. We report that CLN3 interacts with cytoskeleton-associated nonmuscle myosin-IIB. Both CLN3 and myosin-IIB are ubiquitously expressed, yet mutations in either produce dramatic consequences in the CNS such as neurodegeneration in JNCL patients and Cln3^−/− mouse models, or developmental deficiencies in Myh10^−/− mice, respectively. A scratch assay revealed a migration defect associated with Cln3^−/− cells. Inhibition of nonmuscle myosin-II with blebbistatin in WT cells resulted in a phenotype that mimics the Cln3^−/− migration defect. Moreover, inhibiting lysosome function by treating cells with chloroquine exacerbated the migration defect in Cln3^−/−. Cln3^−/− cells traversing a transwell filter under gradient trophic factor conditions displayed altered migration, further linking lysosomal function and cell migration. The myosin-IIB distribution in Cln3^−/− cells is elongated, indicating a cytoskeleton defect caused by the loss of CLN3. In summary, cells lacking CLN3 have defects that suggest altered myosin-IIB activity, supporting a functional and physical interaction between CLN3 and myosin-IIB. We propose that the migration defect in Cln3^−/− results, in part, from the loss of the CLN3–myosin-IIB interaction.     

不同砧木对西瓜嫁接苗耐寒性的影响

以西瓜(Citrullus vulgarris)郑抗1号为接穗,日本南瓜（C. moschata）、黑籽南瓜（C. ficifolia）、葫芦（Lagenaria siceraia）为砧木,研究了嫁接苗和自根苗在（7.5±0.5）℃低温胁迫下叶片相关耐寒性指标的变化。结果表明：低温处理后嫁接苗丙二醛（MDA）含量、电解质渗透率显著低于自根苗;叶绿素、脯氨酸（Pro）、可溶性糖含量以及超氧化物歧化酶（SOD）、过氧化物酶（POD）、过氧化氢酶（CAT）活性显著高于自根苗。与处理前相比,12 d时日本南瓜砧、黑籽南瓜砧和葫芦砧嫁接苗叶绿素含量分别降低了30.48%、28.48%和52.69%;葫芦砧嫁接苗MDA含量6 d时较处理前增加了313.16%;3～12 d日本南瓜砧和黑籽南瓜砧嫁接苗电解质渗透率显著低于葫芦砧嫁接苗;低温处理期间,日本南瓜砧嫁接苗可溶性糖含量分别比黑籽南瓜砧和葫芦砧嫁接苗高出24.71%和31.17%,SOD、POD、CAT酶活性高于另外2个组合。综合各项指标显示：3种砧木均能提高接穗对低温的忍耐能力,其顺序为日本南瓜砧＞黑籽南瓜砧＞葫芦砧。     

随机矩阵理论在肝癌基因功能模块识别中的应用

采用随机矩阵理论方法研究了肝癌的基因表达网络。通过标准误差分析,得到了从富含噪声的肝癌基因网络中分离出真实肝癌基因网络的、去躁最充分的关联系数,分析了由此获得的基因表达网络的13个基因功能模块,发现这些模块与肝癌的产生和发展有密切关系。基于随机矩阵理论的方法克服了以往模块识别方法带有主观因素且不能去除噪声因子的缺陷,是一种有效去除随机噪声、识别基因模块、简化基因网络的方法。由于基因数目的众多及细胞生物过程的复杂性,从整体的角度系统研究肝癌基因表达谱,对理解肝癌分子机制和探索新的治疗方法有重要的现实意义。     

恶性肿瘤化疗所致院内感染31例分析

目的探讨恶性肿瘤患者化疗后发生院内感染的相关因素及防治措施。方法对31例恶性肿瘤患者化疗后发生的院内感染作回顾性分析。结果恶性肿瘤患者化疗后发生院内感染与中性粒细胞减少程度及持续时间有关,感染的部位以呼吸道为主,主要采用粒细胞集落刺激因子（G-CSF）及抗生素治疗。结论恶性肿瘤患者化疗所致院内感染与中性粒细胞减少程度及持续时间密切相关,合理使用G—CSF及抗生素是预防和控制感染的重要措施。     

生物信息学方法预测蛋白质相互作用网络中的功能模块

蛋白质相互作用是大多数生命过程的基础。随着高通量实验技术和计算机预测方法的发展,在各种生物中已获得了数目十分庞大的蛋白质相互作用数据,如何从中提取出具有生物学意义的数据是一项艰巨的挑战。从蛋白质相互作用数据出发获得相互作用网络进而预测出其中的功能模块,对于蛋白质功能预测、揭示各种生化反应过程的分子机理都有着极大的帮助。我们分类概括了用生物信息学预测蛋白质相互作用功能模块的方法,以及对这些方法的评价,并介绍了蛋白质相互作用网络比较的一些方法。     

Structural and functional link between the mitochondrial network and the endoplasmic reticulum

Mitochondrial and endoplasmic reticulum (ER) networks are fundamental for the maintenance of cellular homeostasis and for determination of cell fate under stress conditions. Recent structural and functional studies revealed the interaction of these networks. These zones of close contact between ER and mitochondria called MAM (mitochondria associated membranes) support communication between the two organelles including bioenergetics and cell survival. The existence of macromolecular complexes in these contact sites has also been revealed. In this contribution, we will review: (i) the ER and mitochondria structure and their dynamics, (ii) the basic principles of ER mitochondrial Ca²⁺ transport, (iii) the physiological/pathological role of this cross-talk.     

Catalytic resonance scattering spectral determination of ultratrace horseradish peroxidase using rhodamine S

A highly sensitive and selective resonance scattering spectral assay was proposed for the determination of horseradish peroxidase (HRP), based on its catalytic effect on the H₂O₂ oxidation of KI to form I₃^?. The I₃^? combined respectively with rhodamine (Rh) dye such as rhodamine S (RhS), rhodamine 6G (Rh6G), rhodamine B (RhB) and butyl‐rhodamine B (b‐RhB), to form association particles (Rh‐I₃)_n. The four Rh systems all exhibit a stronger resonance scattering (RS) peak at 424 nm. For the RhS, Rh6G, RhB and b‐RhB systems, HRP concentration in the range of 3.2 × 10^?12 to 4.8 × 10^?9, 2 × 10^?11 to 3.2 × 10^?9, 1.6 × 10^?11 to 3.2 × 10^?9 and 1.6 × 10^?11 to 4 × 10^?9 g/mL was linear to its RS intensity at 424 nm, with a detection limit of 2.2 × 10^?12, 2.5 × 10^?12, 4.4 × 10^?12 and 2.6 × 10^?12 g/mL, respectively. This RhS system was most sensitive and stable, and was applied for the determination of HRP in the hepatitis B surface antibody labeling HRP and water samples, with satisfactory results. Copyright © 2009 John Wiley & Sons, Ltd.